Opened 3 years ago

Closed 3 years ago

#1031 closed defect (fixed)

External Quantification: Annotation table is not always updated when the ext. quant is removed (or added)

Reported by: sena Owned by: dbrentw
Priority: normal Milestone: GRITS - 1.2 SR1
Component: MS annotation management Version: GRITS 1.2.x
Severity: major Keywords:
Cc:

Description

External Quantification is enabled for MS2/MS3 level as well but when I apply/remove external quantification when the "details view" is the active page, I get the following exception and the annotation table does not update correctly (to add/remove corresponding columns):

[ERROR] 2017-10-16 13:37:33,507 [org.grits.toolbox.entry.ms.views.tabbed.MassSpecScansView reLoadView 263] - Error in MSAnnotationPeaksView: reInitializeView
[ERROR] 2017-10-16 13:37:33,508 [org.grits.toolbox.entry.ms.annotation.views.tabbed.MSAnnotationMultiPageViewer reInitPeaksView 810] - Unable to open scans view
java.lang.NullPointerException

at org.grits.toolbox.entry.ms.annotation.views.tabbed.MSAnnotationMultiPageViewer.reInitPeaksView(MSAnnotationMultiPageViewer.java:800)
at org.grits.toolbox.entry.ms.annotation.views.tabbed.MSAnnotationMultiPageViewerTableRefreshWorker.updateMSAnnotationTab(MSAnnotationMultiPageViewerTableRefreshWorker.java:39)
at org.grits.toolbox.entry.ms.annotation.views.tabbed.MSAnnotationMultiPageViewerTableRefreshWorker.doWork(MSAnnotationMultiPageViewerTableRefreshWorker.java:21)
at org.grits.toolbox.widgets.processDialog.GRITSProgressDialog.startWorker(GRITSProgressDialog.java:127)
at org.grits.toolbox.entry.ms.annotation.views.tabbed.MSAnnotationMultiPageViewer.reLoadStructureAnnotationTab(MSAnnotationMultiPageViewer.java:792)
at org.grits.toolbox.entry.ms.annotation.dialog.MSAnnotationExternalQuantDialog.updateViewer(MSAnnotationExternalQuantDialog.java:116)
at org.grits.toolbox.entry.ms.dialog.MassSpecExternalQuantDialog.okPressed(MassSpecExternalQuantDialog.java:436)

Change History (3)

comment:1 Changed 3 years ago by sena

disable opening "external quantification dialog" at MS2/MSn levels

comment:2 Changed 3 years ago by dbrentw

Resolution: fixed
Status: assignedreview

Resolved in SVN revision [2767]

comment:3 Changed 3 years ago by sena

Status: reviewclosed

tested in revision [2767]

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