Opened 4 years ago

Closed 4 years ago

#652 closed enhancement (fixed)

Glycan array: Feature filter

Reported by: Rene Ranzinger Owned by: sena
Priority: normal Milestone: Module - Glycan array analysis
Component: Glycan Array management Version: GRITS 1.1.x
Severity: major Keywords:
Cc: sena

Description

Create a filter that allows to filter structures based on specific properties:

  • presence of absence of unknown information
  • presence of absence of specific units (repeat, UND, cyclic)

Change History (4)

comment:1 Changed 4 years ago by Rene Ranzinger

Owner: set to Rene Ranzinger
Status: newaccepted

comment:2 Changed 4 years ago by Rene Ranzinger

Owner: changed from Rene Ranzinger to sena
Status: acceptedassigned

Implemented in [1206] and documented here. An example is a filter for fully defined structures:

<glycanFeatureFilter name="Fully defined" label="Fully" reducingAlditolAllowed="true" residueSugAllowed="false" unconnectedTreeAllowed="false" unitCyclicAllowed="false" unitProbableAllowed="false" unitRepeatAllowed="false" unitUndAllowed="false" unknownAnomerAllowed="false" unknownBasetypeAllowed="false" unknownConfigurationAllowed="false" unknownLinkagePositionAllowed="false" unknownLinkageTypeAllowed="false" unknownModificationPositionAllowed="false" unknownRepeatAllowed="false" unknownRingsizeAllowed="false">
    <description>Fully defined oligosaccharides, reducing end alditol allowed</description>
</glycanFeatureFilter>

comment:3 Changed 4 years ago by sena

Resolution: fixed
Status: assignedreview

added into the xml in [1255]

comment:4 Changed 4 years ago by Rene Ranzinger

Status: reviewclosed
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