Opened 5 years ago

Closed 4 years ago

#662 closed defect (fixed)

MS editor: Error loading mzML

Reported by: Rene Ranzinger Owned by: dbrentw
Priority: highest Milestone: GRITS - 1.1 SR1
Component: MS data management Version: GRITS 1.1.x
Severity: blocker Keywords:
Cc: dbrentw

Description

There is an error that results in NullPointers for mzML files. See attached log file. Corresponding mzXML can be loaded.

Note: For test data ask Rene for Gaunitz data (1601012A000027).

Attachments (1)

GRITS-2016.07.05-03.49.27.zip (1.0 KB) - added by Rene Ranzinger 5 years ago.

Download all attachments as: .zip

Change History (10)

Changed 5 years ago by Rene Ranzinger

comment:1 Changed 5 years ago by Rene Ranzinger

Owner: set to dbrentw
Status: newassigned

comment:2 Changed 5 years ago by dbrentw

Status: assignedaccepted

comment:3 Changed 5 years ago by dbrentw

Resolution: fixed
Status: acceptedreview

Resolved in SVN revision 1387

comment:4 Changed 5 years ago by Rene Ranzinger

Status: reviewclosed

comment:5 Changed 4 years ago by Rene Ranzinger

Resolution: fixed
Status: closedreopened

comment:6 Changed 4 years ago by Rene Ranzinger

Status: reopenedassigned

The error (or a smiliar one) reappeared with other MALDI MS data from ABI Science (CS N-Glycan MS.mzxml). The mzxml file was generated from the t2d file and misses the index. After reconversion with msconvert a valid mzXML is generated and can be loaded. However when generating the mzML file this file will be loaded but the "Can not create Scan tab" error appears.

comment:7 Changed 4 years ago by dbrentw

Status: assignedaccepted

comment:8 Changed 4 years ago by dbrentw

Resolution: fixed
Status: acceptedreview

Resolved (i hope) in SVN revisions 1444, 1389, 1388, 1387

comment:9 Changed 4 years ago by Rene Ranzinger

Status: reviewclosed
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