Opened 5 years ago
Closed 5 years ago
#892 closed defect (fixed)
Annotation Editor: Bisection not working for topology
Reported by: | Rene Ranzinger | Owned by: | dbrentw |
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Priority: | normal | Milestone: | GRITS - 1.2 |
Component: | MS annotation management | Version: | GRITS 1.1.x |
Severity: | major | Keywords: | |
Cc: | dbrentw, sena |
Description
Mindy reported a problem that the bisection column for topology structures is not filled correctly (see image). If the corresponding fully defined structure is used its working.
Attachments (1)
Change History (5)
Changed 5 years ago by
Attachment: | thumbnail_etrlydt0.jpg.png added |
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comment:1 Changed 5 years ago by
Owner: | set to Rene Ranzinger |
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Status: | new → accepted |
comment:2 Changed 5 years ago by
Cc: | dbrentw sena added |
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Owner: | changed from Rene Ranzinger to dbrentw |
Status: | accepted → assigned |
comment:3 Changed 5 years ago by
Resolution: | → fixed |
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Status: | assigned → review |
Resolved in SVN revision 2121
comment:4 Changed 5 years ago by
Status: | review → closed |
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I checked GlycoVisitorNGlycanInformation visitor in org.grits.toolbox.ms.annotation. If I take a bisected structure from the topology database (GOG73-T) and run it it GRITS it says non bisected. If I convert the GWS sequence to GlycoCT and let the visitor run it it tells me true for bisected. Possible source for the error: