Timeline



04/14/2016:

23:02 Grits_Ids_3_x_to_E4 edited by shan
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22:56 Grits_Ids_3_x_to_E4 edited by shan
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22:56 Grits_Classes_3_x_to_E4 edited by shan
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22:25 GritsDocumentation edited by shan
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22:23 Grits_Classes_3_x_to_E4 created by shan
22:05 Ticket #619 (qrtPCR master gene list manager: deselect button does not work properly) created by sena
deselect button works strangely when the user makes selections from a …
22:02 Ticket #618 (qrtPCR gene list management: selection/deselection problems) created by sena
In Gene List Manager: - do a search, select a few genes by clicking …

04/13/2016:

22:11 Ticket #617 (GELATO: Charge problem in TIM) created by Rene Ranzinger
When annotating a TIM spectra (up to 4Na) the program finds only 11 …
21:35 Ticket #616 (qrtPCR master gene list manager: copying into the sublist does not ...) created by sena
When the user select genes to copy into a sublist, they are placed on …
17:43 Grits_Ids_3_x_to_E4 edited by shan
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17:03 Ticket #615 (qRT-PCR: Primer manager) created by Rene Ranzinger
Implementation of a manager tool for the PCR primers that works before …
16:55 Ticket #614 (GALATO: Modifying algorithm to handle S in positive mode) created by Rene Ranzinger
If a Sulfate is part of the structure there is in positive mode a …

04/11/2016:

23:09 Grits_Ids_3_x_to_E4 edited by shan
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23:09 Grits_Ids_3_x_to_E4 edited by shan
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23:04 GritsDocumentation edited by shan
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23:04 Grits_Ids_3_x_to_E4 created by shan

04/08/2016:

22:42 GritsDocumentation edited by shan
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22:41 Grits_InjectedObjects edited by shan
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22:02 Ticket #613 (Explore integration of swing GUI in e4 plugins) created by Rene Ranzinger
That may work with using the swing renderer that is part of e4.

04/04/2016:

16:26 TutorialGrits edited by shan
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16:24 GritsDocumentation edited by shan
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16:24 Grits_InjectedObjects created by shan
16:22 E4_Migration_Tutorial edited by shan
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04/01/2016:

23:07 Ticket #612 (Annotation Editor: Displaying Ms profile spectra) created by Rene Ranzinger
When opening a MS profile annotation first the list of all MS1 (one …
23:04 Ticket #611 (GALATO: Upload of maldi MS2 data) created by Rene Ranzinger
Support the upload, annotation and display of a single MS2 data set …
20:52 Ticket #610 (mzML error for MALDI files) created by Rene Ranzinger
When converting Bruker MALDI files to mzML a file is generated that …
16:04 E4_Notes_Future_Migration edited by shan
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16:01 E4_Notes_Future_Migration edited by shan
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03/31/2016:

22:20 E4_Migration_Tutorial_Links edited by shan
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22:18 E4_Migration_Tutorial_Links edited by shan
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22:17 E4_Migration_Tutorial_Links edited by shan
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18:23 E4_Notes_Future_Migration edited by shan
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16:52 E4_Notes_Future_Migration edited by shan
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16:52 E4_Migration_Tutorial_Links edited by shan
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03/30/2016:

22:32 Ticket #609 (Glycan array: integrate identification workflows) created by Rene Ranzinger
One example to use glycan array for identification from Brian Habb: * …
22:26 Ticket #608 (Use mzjava to compare spectra in spectrum libs) created by Rene Ranzinger
Davide forwarded me your email with questions about MzJava. > - I …
18:10 E4_Notes_Future_Migration edited by shan
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18:10 E4_Notes_Future_Migration edited by shan
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18:02 E4_Notes_Future_Migration created by shan
18:01 TutorialGrits edited by shan
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03/29/2016:

22:49 E4_Migration_Tutorial edited by shan
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22:49 E4_Migration_Tutorial edited by shan
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20:48 E4_Migration_Tutorial_Links edited by shan
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18:38 E4_Replacing_Entry_Editor edited by shan
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18:29 E4_Replacing_Entry_Editor edited by shan
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18:26 E4_Replacing_Entry_Editor edited by shan
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17:59 E4_Replacing_Entry_Editor edited by shan
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17:56 img1.png attached to E4_Replacing_Entry_Editor by shan
17:56 E4_Replacing_Entry_Editor edited by shan
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17:20 TutorialGrits edited by shan
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17:19 E4_Replacing_Entry_Editor created by shan

03/28/2016:

22:54 Ticket #607 (Thermo app) created by Rene Ranzinger
Was of integrating the GRITS functionality with Thermo cloud services: …
22:51 Ticket #606 (Byonic integration of the curated databases) created by Rene Ranzinger
Try to integrate the human curated databases with Byonic to allow …
22:41 Ticket #605 (Species specific databases) created by Rene Ranzinger
We should work on and provide species specific databases on our …
22:40 Ticket #604 (GELATO Node for Proteome Discoverer) created by Rene Ranzinger
As collaboration with Thermo we should think about a GELATO node for …
22:21 Ticket #603 (MS progress bars: stuck on MAC) created by Rene Ranzinger
The following behavior is described for GELATO but seem to be true for …
22:17 Ticket #602 (License for source code) created by Rene Ranzinger
We need to decide on a license for source code if we want to prove the …
22:16 Ticket #601 (Webbased UI) created by Rene Ranzinger
A recommendation from the advisory board meeting 2016 was to change …
22:15 Ticket #600 (Server based backend) created by Rene Ranzinger
Implement an alternative backend system that is based on a server. The …
22:01 Ticket #544 (GELATO: Preferences for Gelato settings) closed by Rene Ranzinger

03/23/2016:

19:43 Ticket #599 (Error when opening project on different systems) created by dbrentw
If you create a project in Windows and then attempt to open it on Mac, …
15:00 TreeViewerNatTable edited by sena
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03/22/2016:

22:21 TreeViewerNatTable edited by sena
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22:19 TreeViewerNatTable edited by sena
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22:03 TutorialGrits edited by shan
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22:02 E4_Migration_Tutorial_Links created by shan
21:59 TutorialGrits edited by shan
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21:57 TreeViewerNatTable created by sena
21:57 E4_Migration_Tutorial edited by shan
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21:52 Migrate_View_To_Part created by shan
21:45 TutorialEclipse edited by sena
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21:21 E4_Migration_Tutorial edited by shan
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03/21/2016:

22:25 Ticket #598 (Glycan side specific display) created by Rene Ranzinger
Have a display allowing to present side specific glycan data.
22:23 Ticket #597 (MS convert problems) created by Rene Ranzinger
Mindy reported problems using her local MS convert.
19:41 Ticket #596 (Annotation Editor: Opening MS3 with with precursor annotation (MAC)) created by Rene Ranzinger
Related to the simone workspace on the USB: * Open scan 27 annotation …
19:39 Ticket #595 (MS Merge: Opening old merge entries (MAC)) created by Rene Ranzinger
Related to the simone workspace on the USB: * The report "2" was …
19:36 Ticket #594 (Service lab: Query options) created by Rene Ranzinger
There are certain standard queries and search criteria that need to be …
19:35 Ticket #593 (Project management: Add a number to tasks) created by Rene Ranzinger
Add another columns for number of executions for a task. e.g. …
17:14 Ticket #592 (Service lab plugin) created by Rene Ranzinger
Create a plugin specific to service lab. This plugin will be mainly …
17:11 Ticket #591 (Generic cartoon preferences) created by Rene Ranzinger
The cartoon preferences should be moved to a non MS plugin so that …

03/19/2016:

20:52 Ticket #590 (Sample manager: Progressbar for loading dictionaries) created by Rene Ranzinger
On slow computers the loading of species dictionary can take several …
20:49 Ticket #589 (Sample manager: Species dictionary (32bit)) created by Rene Ranzinger
When opening the 32bit Windows version. * go directly to sample …
20:46 Ticket #588 (Sample manager: Dropbown for boolean descriptors) created by Rene Ranzinger
For descriptors such as biological a dropdown with prefilled values …

03/17/2016:

22:52 Ticket #587 (MS Merge: Preference init) closed by Rene Ranzinger
20:10 Milestone GRITS - 1.1 completed
Second version of GRITS which will include * General Bug fixes of 1.0 …
20:10 Ticket #585 (Annotation Editor: Opening MS3 with no precursor annotation) closed by Rene Ranzinger
19:56 Ticket #562 (No preferences for Merge) closed by Rene Ranzinger
19:56 Ticket #587 (MS Merge: Preference init) created by Rene Ranzinger
There is a inconsistency how merge preferences are initialized: Case …

03/16/2016:

21:35 Ticket #579 (MS editor: Suboptimales behavior when uploading wrong files) closed by Rene Ranzinger
21:02 Ticket #583 (Annotation Editor: Column chooser for candidate table does not show) closed by Rene Ranzinger
20:50 Ticket #580 (MS editor: Default selection for peak list file) closed by Rene Ranzinger
16:22 Ticket #574 (MS editor: Changes to file upload) closed by Rene Ranzinger
16:12 Ticket #586 (MS Merge: Structure specific columns) created by Rene Ranzinger
Are the structure specific columns (#GalNAc etc.) needed for the merge …
16:10 Ticket #3 (New label for charge columns) closed by Rene Ranzinger
01:44 Ticket #577 (Annotation Editor: Column preferences not applied) closed by Rene Ranzinger

03/15/2016:

22:44 Ticket #573 (Annotation Editor: MS2 starts with summary page) closed by Rene Ranzinger
22:44 Ticket #585 (Annotation Editor: Opening MS3 with no precursor annotation) created by Rene Ranzinger
Related to the "Simone.rar" workspace in Dropbox. * Open Asthma 2 …
22:34 Ticket #578 (Annotation Editor: 2 Compositions columns) closed by Rene Ranzinger
22:24 Ticket #584 (MS Merge: Opening of old reports) created by Rene Ranzinger
Related to the "Simone.rar" workspace in dropbox. * Open the "Human …
22:16 Ticket #576 (charges not correct in Merge) closed by Rene Ranzinger
22:14 Ticket #583 (Annotation Editor: Column chooser for candidate table does not show) created by Rene Ranzinger
* Open MS1 annotation * Right click on the upper table header -> …
22:04 Ticket #571 (MS editor: Error without Full MS) closed by Rene Ranzinger
21:55 Ticket #582 (MS editor: Exceptions opening old MS entries) created by Rene Ranzinger
Related to "Simone.rar" workspace in dropbox. * Open workspace * Open …
21:52 Ticket #581 (MS editor: Unable to delete entries with incorrect files) created by Rene Ranzinger
This is related to #579. * Create an entry with an invalid file or …
21:43 Ticket #580 (MS editor: Default selection for peak list file) created by Rene Ranzinger
By default the Dropdown for the peaklist format is emtpy. It still …
21:40 Ticket #579 (MS editor: Suboptimales behavior when uploading wrong files) created by Rene Ranzinger
Primary problem: When creating a new MS entry upload an incorrect file …
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