Timeline



10/26/2017:

16:11 Ticket #1036 (Custom annotation for LC-MS/MS data) created by dbrentw
I attempted to use Custom Annotation of O-glycans that were reduced, …

10/25/2017:

19:34 Ticket #1035 (Duplicate images on spectra) created by dbrentw
If multiple subscans of the same precursor are generated, resulting in …

10/24/2017:

22:13 Ticket #849 (GELATO: Error logs when cancel) closed by sena
22:06 Ticket #454 (Canceling of long-running processes) closed by sena
21:43 Ticket #1014 (MS Annotation: multiple external quantification files error) closed by sena
21:10 Ticket #1030 (External Quantification: Files are not locked with the correct Entry) closed by sena
tested in revision [2770]
21:09 Ticket #1024 (Custom Annotation: ship GRITS with pre-defined custom annotation ...) closed by sena
tested in revision [2770]
21:05 Ticket #565 (Mass Spec Preference: Own subtree) closed by sena
21:01 Ticket #558 (Workspace chooser: Dropdown on MAC) closed by sena
tested on Mac laptop as well.
20:02 Ticket #1026 (MS Annotation: TIM experiment in negative mode does not get any annotations) closed by sena
20:02 Ticket #1028 (MS Annotation: TIM annotation entry does not open) closed by sena
20:01 Ticket #1029 (TIM data does not use polarity) closed by sena

10/23/2017:

22:04 Ticket #1031 (External Quantification: Annotation table is not always updated when ...) closed by sena
tested in revision [2767]

10/20/2017:

20:20 Ticket #1034 (Preferences: adding new preferences from files with new version) created by sena
Currently the preferences for GELATO and custom annotation are loaded …
17:20 Ticket #1032 (MS Editor: Exceptions while opening annotation file in the editor) closed by sena
tested in revision [2761]
17:17 Ticket #945 (MS Editor: Multiple instance of non modal dialogs) closed by sena
17:17 Ticket #1033 (MS Experiment: MS Entry is allowed to be created directly under Project) closed by sena
tested in revision [2761]
17:15 Ticket #1013 (ProjectExplorer shows incorrect icons for entries and invalid contents) closed by sena
tested with revision [2761]
17:03 Ticket #386 (Annotation Editor: Number formating) closed by sena
16:56 Ticket #912 (Annotation Editor: Export structure) closed by sena
tested in revision [2761]
16:51 Ticket #1027 (Running GELATO multiple times on same DB gives different results) closed by sena
tested with revision [2761]
16:46 Ticket #1005 (MS GELATO wizard: default Mass type selection) closed by sena

10/19/2017:

23:02 Ticket #1009 (GELATO Annotation: no annotation for Velos files with "trust charge state") closed by sena
Tested with Velos data (from Training course) and "trust charge" is …
21:31 Ticket #1002 (External Quantification: Locking of files does not work) closed by sena
20:42 Ticket #969 (Annotation Editor: Export MS2 data to Excel) closed by sena

10/18/2017:

19:10 Ticket #1033 (MS Experiment: MS Entry is allowed to be created directly under Project) created by sena
If you select a project entry and right-click to create an MS …

10/16/2017:

19:52 Ticket #1032 (MS Editor: Exceptions while opening annotation file in the editor) created by sena
I am getting the following exceptions while opening an MS entry and …
19:44 Ticket #1031 (External Quantification: Annotation table is not always updated when ...) created by sena
External Quantification is enabled for MS2/MS3 level as well but when …

10/13/2017:

21:35 Ticket #1030 (External Quantification: Files are not locked with the correct Entry) created by sena
When MS files are locked, the Entry that uses them should be recorded …
18:30 Ticket #786 (MS Annotation Editor - Cannot save changes in "MS Properties" tab) closed by sena
18:12 Ticket #871 (Delete doesn't do complete cleanup) closed by sena
17:12 Ticket #971 (Custom Annotation: change symbol for dirty) closed by sena

10/12/2017:

19:49 Ticket #1018 (MS Editor: adding the same file sometimes overwrites the previous content) closed by sena
the same file cannot be uploaded the second time if the category is …
18:13 Ticket #1029 (TIM data does not use polarity) created by dbrentw
the phoney parent scan of TIM data does not get its polarity set.
17:20 Ticket #1004 (MS Annotation: incorrect columns are displayed in scientific notation ...) closed by sena
17:12 Ticket #1001 (MSConvert: Does not work for certain folder and filenames) closed by sena

10/11/2017:

23:02 Ticket #1012 (MS Annotation: LC-MS/MS experiment does not show the annotations) closed by sena
21:06 Ticket #1020 (MS Profile doesn't show annotations) closed by sena
20:42 Ticket #1015 (GELATO Wizard: dialog for adding databases is too small) closed by sena
20:42 Ticket #1006 (MS File Upload: file filter for mzXML/mxML not working) closed by sena
20:35 Ticket #1016 (MS Merge: unable to edit alias column) closed by sena
19:35 Ticket #1022 (MS Annotation: Change the label and contents for "Polarity is ...) closed by sena
19:33 Ticket #1021 (MS Experiment Types: change labels) closed by sena
19:31 Ticket #1019 (MS Editor: changes seem to be saved even if you don't save them) closed by sena
I've reverted this behavior since there is no way to cancel (revert) …
19:28 Ticket #1011 (MS Annotation Spectra: legend of the coloring is missing for MS1 ...) closed by sena
19:25 Ticket #1007 (MS Editor: allow opening of mzXML/mzML type of quantification files) closed by sena
19:22 Ticket #1008 (MS GELATO Wizard: finish button does not get enabled even if the ...) closed by sena
19:21 Ticket #1000 (External Quantification: does not check the validity of the file) closed by sena
19:14 Ticket #906 (MS Editor: Redesign of editor - MS properties) closed by sena
19:12 Ticket #847 (GELATO: NExt button on Last page not disabled) closed by sena
19:11 Ticket #972 (Custom Annotation: buttons) closed by sena
18:59 Ticket #1028 (MS Annotation: TIM annotation entry does not open) created by sena
I have run a GELATO annotation with TIM data. Although the annotation …
18:28 Ticket #1027 (Running GELATO multiple times on same DB gives different results) created by dbrentw
Open GRITS and perform GELATO on an MS entry. Then, re-run GELATO on …
17:35 Ticket #596 (Annotation Editor: Opening MS3 with with precursor annotation (MAC)) closed by sena
17:34 Ticket #910 (MS Merge: One sided interactive merge) closed by sena
17:33 Ticket #961 (MS Merge: Export into Excel does not work) closed by sena
tested in revision [2729]
17:25 Ticket #950 (Database Bot: new label for Browse buttons) closed by sena

10/09/2017:

21:04 Ticket #1026 (MS Annotation: TIM experiment in negative mode does not get any annotations) created by sena
Here is the link to the mzxml file to be annotated: …
20:11 Ticket #1025 (Reverse workflow for Byonic) created by Rene Ranzinger
* Add a new menu entry to annotate a Byonic data file with glycomics …
17:25 Ticket #1024 (Custom Annotation: ship GRITS with pre-defined custom annotation ...) created by sena
Similar to GELATO settings that come with GRITS (from the jar), …
17:23 Ticket #1023 (GRITS Intro: add a "do not show again" checkbox) created by sena
When there are no projects in a workspace, GRITS intro page is shown …
17:20 Ticket #1022 (MS Annotation: Change the label and contents for "Polarity is ...) created by sena
The column "Polarity is Positive" should be renamed to "Polarity" and …
17:18 Ticket #1021 (MS Experiment Types: change labels) created by sena
MS Experiment Types should be labeled as follows: LC-MS/MS | …

10/06/2017:

18:05 Ticket #583 (Annotation Editor: Column chooser for candidate table does not show) reopened by sena
we still don't see column chooser in the lower table

10/05/2017:

20:53 Ticket #1020 (MS Profile doesn't show annotations) created by dbrentw
Like the LC-MS/MS issue, after the addition of support for multiple …

10/04/2017:

23:26 Ticket #1019 (MS Editor: changes seem to be saved even if you don't save them) created by sena
If you add files to a MS entry and close it without saving, the …
19:16 Ticket #1018 (MS Editor: adding the same file sometimes overwrites the previous content) created by sena
If the same name file (instrument file) is uploaded as both annotation …

10/03/2017:

23:50 Ticket #1017 (MS Merge: ability to hide rows with common annotations) created by sena
In the merge report, create an option to hide rows which have the same …
23:48 Ticket #1016 (MS Merge: unable to edit alias column) created by sena
We have added 3 experiments for the merge. Editing the alias for the …
23:45 Ticket #1015 (GELATO Wizard: dialog for adding databases is too small) created by sena
The part of the reducing end name/mass is not visible on small screen. …
23:43 Ticket #1014 (MS Annotation: multiple external quantification files error) created by sena
If there are multiple instrument external quantification files added …

09/29/2017:

22:09 Ticket #1013 (ProjectExplorer shows incorrect icons for entries and invalid contents) created by sena
I've seen strange workspaces where the sample/archive/ms entries are …
19:22 Ticket #1012 (MS Annotation: LC-MS/MS experiment does not show the annotations) created by sena
I've created a LC-MS experiment using the following file: …
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