Changes between Version 3 and Version 4 of CreatingAnnotion
- Timestamp:
- 11/30/2016 08:13:47 PM (4 years ago)
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CreatingAnnotion
v3 v4 10 10 Assuming a Direct Infusion experiment, the minimum data for GELATO is: 11 11 12 1) MS1 scan (example code) 12 1) Creating Test Data 13 a) MS1 scan (example code) 13 14 {{{ 14 15 Scan ms1scan = new Scan(); // create new Scan object … … 26 27 }}} 27 28 28 2) MS2 scan (example code)29 b) MS2 scan (example code) 29 30 {{{ 30 31 Scan ms2scan = new Scan(); // create new Scan object … … 43 44 }}} 44 45 45 3) Populate the MS1 object with subscans46 c) Populate the MS1 object with subscans 46 47 {{{ 47 48 List<Integer> subScans = new ArrayList<>(); // create a list of integers to contain all scan numbers that were subscans of the full MS1 scan … … 50 51 }}} 51 52 52 4) Add the scans to the Hashmap datastructure53 d) Add the scans to the Hashmap datastructure 53 54 {{{ 54 55 HashMap<Integer, Scan> testData = new HashMap<>(); // create the data structure to be used by Gelato