Changes between Version 6 and Version 7 of FileOrganization


Ignore:
Timestamp:
03/30/2017 05:54:21 PM (5 years ago)
Author:
dbrentw
Comment:

--

Legend:

Unmodified
Added
Removed
Modified
  • FileOrganization

    v6 v7  
    22  1) In the GRITS project annotation folder, a single archive (.zip) is created that contains all files:
    33    a) data.xml, dataHeader.xml, settings.xml and xml file for all scans in the project.
    4        ^^* Note that the first MS1 scan xml file (e.g. 1.xml) is the MS1 "overview" file containing all precursor peaks
     4       ^^* Note that the first MS1 scan xml file (e.g. 1.xml) is the MS1 "overview" file containing all precursor peaks[[BR]]
    55       ^^* For TIM data (no MS1 scan) an phony (simulated) MS1 "overview" file is created (0.xml)
    66For LC-MS/MS data, the data are organized as follows:
    7   1) A .zip file (e.g. 8014.zip) at the root of the annotation folder containing the data.xml, dataHeader.xml, and settings.xml files
    8   2) A folder w/ the name of the entry (e.g. 8014) which contains compressed files (.zip) for every MS1 file (e.g. 1.zip, 12.zip, etc)
    9   3) Each individual MS1 archive (e.g. 1.zip) contains the xml file for the MS1 scan, all sub-scans, and the data.xml for that MS1 scan
    10     a) The individual MS1 archives are similar to the direct infusion archives except only for the specified MS1 scan (e.g. 1.zip)
     7  1) A .zip file (e.g. 8014.zip) at the root of the annotation folder containing the data.xml, dataHeader.xml, and settings.xml files[[BR]]
     8  2) A folder w/ the name of the entry (e.g. 8014) which contains compressed files (.zip) for every MS1 file (e.g. 1.zip, 12.zip, etc)[[BR]]
     9  3) Each individual MS1 archive (e.g. 1.zip) contains the xml file for the MS1 scan, all sub-scans, and the data.xml for that MS1 scan [[BR]]
     10    a) The individual MS1 archives are similar to the direct infusion archives except only for the specified MS1 scan (e.g. 1.zip)[[BR]]
    1111    ^^*There is no Peak data in the data.xml file in the main archive (e.g. 8014.zip). The Peak data are in the data.xml files for the individual MS1 scans (e.g. 1.zip)