Changes between Version 4 and Version 5 of MS_Profiler_Plugin_Handler


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Timestamp:
06/13/2018 09:34:36 PM (3 years ago)
Author:
lovina
Comment:

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  • MS_Profiler_Plugin_Handler

    v4 v5  
    55[[Image(HandlerMSAnnotate.JPG, 600px)]]
    66
     7**It allows users to perform the following actions :**
     8
     9- **Add** : Add a new data file which is also known as the peaklist file.
     10- **Remove** : Delete any existing data file.
     11
     12In the dropdown database combo we can see the list of databases which the users have added with the help of profile database preference option.
     13
     14In the result file text box we browse to the location where we want the output to be saved.
     15
     16Accuracy can be specified using two units ppm and dalton depending upon the user's requirement.
     17
    718== Format of the Data File (PeakList file) ==
     19
     20This plugin uses the columns named **index**, **centroid mass** and the **area**. The order of this columns in the excel sheet does not matter only things that is important is that this columns need to present in the data file.
     21
     22You can have multiple data files which will be compared against the existing selected database to get the output of annotated Glycans.
    823
    924[[Image(PeaklistFile.JPG, 600px)]]
     
    1126== Format of the output excel file after annotation ==
    1227
     28The output file will contain the matched entries (within the specified accuracy) from the selected database and the data files (peaklist files) in the sheet named "Annotated" and matched as well as unmatched entries in the sheet named "complete".
     29
    1330[[Image(MSAnnotateResult.JPG, 600px)]]